Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps translocon maturation chaperone lptm | FE383_RS19310 | Not Available | Positive | 3957919 - 3958122 | 7177.59 |
| diaminopimelate epimerase | FE383_RS19315 | Not Available | Positive | 3958159 - 3958983 | 30210.4 |
| duf484 domain-containing protein | FE383_RS19320 | Not Available | Positive | 3958980 - 3959687 | 26730.4 |
| tyrosine recombinase xerc | FE383_RS19325 | Not Available | Positive | 3959684 - 3960580 | 33869.7 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | FE383_RS19330 | Not Available | Positive | 3960580 - 3961296 | 27123.4 |
| dna helicase ii | FE383_RS19335 | Not Available | Positive | 3961380 - 3963542 | 81994.7 |
| phosphodiester glycosidase family protein | FE383_RS19340 | Not Available | Negative | 3963689 - 3964453 | 27910.0 |
| protein ysgd | FE383_RS22565 | Not Available | Positive | 3964615 - 3964671 | 2140.55 |
| magnesium/cobalt transporter cora | FE383_RS19345 | Not Available | Positive | 3964823 - 3965773 | 36591.8 |
| duf2628 domain-containing protein | FE383_RS19350 | Not Available | Negative | 3965816 - 3966196 | 14550.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





