Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | FE383_RS19210 | Not Available | Positive | 3937864 - 3938538 | 24221.7 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | FE383_RS19215 | Not Available | Positive | 3938543 - 3939673 | 41903.4 |
| lipid iii flippase wzxe | FE383_RS19220 | Not Available | Positive | 3939675 - 3940925 | 44962.3 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | FE383_RS19225 | Not Available | Positive | 3940922 - 3942001 | 40641.9 |
| eca oligosaccharide polymerase | FE383_RS19230 | Not Available | Positive | 3941998 - 3943350 | 51520.2 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | FE383_RS19235 | Not Available | Positive | 3943353 - 3944093 | 27929.8 |
| bifunctional threonine/serine apc transporter thrp | FE383_RS19240 | Not Available | Positive | 3944284 - 3945669 | 50402.1 |
| Trna-arg | Not Available | Not Available | Positive | 3945772 - 3945848 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 3945907 - 3945982 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3946003 - 3946089 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





