Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhlb | FE383_RS19160 | Not Available | Negative | 3927762 - 3929027 | 47128.7 |
| thioredoxin trxa | FE383_RS19165 | Not Available | Positive | 3929158 - 3929487 | 11807.2 |
| rho operon leader peptide rhol | FE383_RS19170 | Not Available | Positive | 3929628 - 3929729 | 3750.4 |
| transcription termination factor rho | FE383_RS19175 | Not Available | Positive | 3929814 - 3931073 | 47007.1 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | FE383_RS19180 | Not Available | Positive | 3931313 - 3932416 | 40959.7 |
| eca polysaccharide chain length modulation protein | FE383_RS19185 | Not Available | Positive | 3932428 - 3933474 | 39491.3 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | FE383_RS19190 | Not Available | Positive | 3933530 - 3934660 | 42247.1 |
| udp-n-acetyl-d-mannosamine dehydrogenase | FE383_RS19195 | Not Available | Positive | 3934657 - 3935919 | 45841.3 |
| dtdp-glucose 4,6-dehydratase | FE383_RS19200 | Not Available | Positive | 3935919 - 3936986 | 39755.9 |
| glucose-1-phosphate thymidylyltransferase rfba | FE383_RS19205 | Not Available | Positive | 3937005 - 3937886 | 32736.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





