Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 2 small subunit | FE383_RS19110 | Not Available | Positive | 3915598 - 3915861 | 9703.74 |
| branched-chain-amino-acid transaminase | FE383_RS19115 | Not Available | Positive | 3915881 - 3916810 | 34095.6 |
| dihydroxy-acid dehydratase | FE383_RS19120 | Not Available | Positive | 3916875 - 3918725 | 65535.4 |
| threonine ammonia-lyase, biosynthetic | FE383_RS19125 | Not Available | Positive | 3918728 - 3920272 | 56198.5 |
| hth-type transcriptional activator ilvy | FE383_RS19130 | Not Available | Negative | 3920324 - 3921217 | 33206.3 |
| ketol-acid reductoisomerase | FE383_RS19135 | Not Available | Positive | 3921367 - 3922842 | 54072.2 |
| peptidylprolyl isomerase ppic | FE383_RS19140 | Not Available | Negative | 3922929 - 3923210 | 10232.6 |
| hypothetical protein | FE383_RS19145 | Not Available | Negative | 3923409 - 3923857 | 16302.7 |
| dna helicase rep | FE383_RS19150 | Not Available | Positive | 3924074 - 3926095 | 77028.7 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | FE383_RS19155 | Not Available | Negative | 3926142 - 3927626 | 54874.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





