Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit a | FE383_RS18960 | Not Available | Negative | 3884631 - 3885446 | 30305.1 |
| f0f1 atp synthase subunit i | FE383_RS18965 | Not Available | Negative | 3885455 - 3885835 | 13632.5 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | FE383_RS18970 | Not Available | Negative | 3886452 - 3887075 | 23432.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | FE383_RS18975 | Not Available | Negative | 3887139 - 3889028 | 69525.4 |
| fmn-binding protein mioc | FE383_RS18980 | Not Available | Negative | 3889407 - 3889850 | 15808.5 |
| transcriptional regulator asnc | FE383_RS18985 | Not Available | Negative | 3889940 - 3890398 | 16888.7 |
| aspartate--ammonia ligase | FE383_RS18990 | Not Available | Positive | 3890550 - 3891542 | 36652.6 |
| atpase rava stimulator viaa | FE383_RS18995 | Not Available | Negative | 3891547 - 3892998 | 55910.6 |
| atpase rava | FE383_RS19000 | Not Available | Negative | 3892992 - 3894488 | 56392.1 |
| low affinity potassium transporter kup | FE383_RS19005 | Not Available | Positive | 3894711 - 3896579 | 69298.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





