Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase large subunit | FE383_RS18615 | Not Available | Negative | 3814491 - 3816179 | 60444.2 |
| ilvb operon leader peptide ivbl | FE383_RS18620 | Not Available | Negative | 3816285 - 3816383 | 3206.11 |
| type i toxin-antitoxin system toxin tisb | FE383_RS18625 | Not Available | Positive | 3816948 - 3817037 | 3222.32 |
| protein ysde | FE383_RS22560 | Not Available | Negative | 3817161 - 3817235 | 2827.45 |
| multidrug efflux mfs transporter emrd | FE383_RS18630 | Not Available | Positive | 3817317 - 3818501 | 42218.5 |
| radical sam protein | FE383_RS18635 | Not Available | Negative | 3818509 - 3819006 | 19188.9 |
| duf202 domain-containing protein | FE383_RS18640 | Not Available | Negative | 3819003 - 3819365 | 13769.1 |
| yidh family protein | FE383_RS18645 | Not Available | Negative | 3819355 - 3819702 | 12780.1 |
| protein yidi | FE383_RS18650 | Not Available | Positive | 3819810 - 3820259 | 15729.8 |
| sulfatase-like hydrolase/transferase | FE383_RS18655 | Not Available | Negative | 3820306 - 3821799 | 57298.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





