Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease ph | FE383_RS18465 | Not Available | Negative | 3779284 - 3780000 | 25353.5 |
| yicc/yloc family endoribonuclease | FE383_RS18470 | Not Available | Positive | 3780127 - 3780990 | 33176.9 |
| dna damage-inducible protein d | FE383_RS18475 | Not Available | Positive | 3781211 - 3782035 | 31079.9 |
| trimeric intracellular cation channel family protein | FE383_RS18480 | Not Available | Positive | 3782325 - 3782942 | 22049.8 |
| nad-dependent dna ligase ligb | FE383_RS18485 | Not Available | Negative | 3782939 - 3784621 | 63182.8 |
| guanylate kinase | FE383_RS18490 | Not Available | Positive | 3784879 - 3785502 | 23594.1 |
| dna-directed rna polymerase subunit omega | FE383_RS18495 | Not Available | Positive | 3785557 - 3785832 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | FE383_RS18500 | Not Available | Positive | 3785851 - 3787959 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | FE383_RS18505 | Not Available | Positive | 3787966 - 3788655 | 25344.6 |
| atp-dependent dna helicase recg | FE383_RS18510 | Not Available | Positive | 3788661 - 3790742 | 76435.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





