Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 9 protein | FE383_RS18365 | Not Available | Negative | 3761698 - 3762771 | 41672.8 |
| hypothetical protein | FE383_RS18370 | Not Available | Negative | 3762804 - 3763647 | 30489.1 |
| lipopolysaccharide core heptose(ii) kinase rfay | FE383_RS18375 | Not Available | Negative | 3763717 - 3764415 | 27462.6 |
| lipopolysaccharide 1,2-glucosyltransferase rfaj | FE383_RS18380 | Not Available | Negative | 3764433 - 3765449 | 39042.4 |
| lipopolysaccharide 3-alpha-galactosyltransferase | FE383_RS18385 | Not Available | Negative | 3765489 - 3766508 | 39425.2 |
| lipopolysaccharide 1,6-galactosyltransferase | FE383_RS18390 | Not Available | Negative | 3766508 - 3767587 | 40828.1 |
| lps core biosynthesis protein rfas | FE383_RS18395 | Not Available | Negative | 3767631 - 3768566 | 36732.5 |
| lipopolysaccharide core heptose(i) kinase rfap | FE383_RS18400 | Not Available | Negative | 3768603 - 3769400 | 30874.2 |
| lipopolysaccharide glucosyltransferase i | FE383_RS18405 | Not Available | Negative | 3769393 - 3770517 | 42286.4 |
| lipopolysaccharide core heptosyltransferase rfaq | FE383_RS18410 | Not Available | Negative | 3770514 - 3771584 | 40216.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





