Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | FE383_RS18150 | Not Available | Negative | 3716501 - 3717637 | 41773.5 |
| duf3302 domain-containing protein | FE383_RS18155 | Not Available | Negative | 3717643 - 3717966 | 12409.3 |
| hypothetical protein | FE383_RS22405 | Not Available | Positive | 3718149 - 3718292 | 5287.71 |
| aldehyde dehydrogenase aldb | FE383_RS18165 | Not Available | Negative | 3718511 - 3720049 | 56309.6 |
| l-threonine dehydrogenase | FE383_RS18170 | Not Available | Negative | 3720214 - 3721365 | 40353.7 |
| selenocysteine-specific translation elongation factor | FE383_RS18175 | Not Available | Negative | 3721555 - 3723399 | 68871.5 |
| l-seryl-trna(sec) selenium transferase | FE383_RS18180 | Not Available | Negative | 3723396 - 3724787 | 50610.2 |
| glutathione s-transferase | FE383_RS18185 | Not Available | Negative | 3724885 - 3725493 | 22546.3 |
| rhs element protein rhsa | FE383_RS18190 | Not Available | Positive | 3725721 - 3729854 | 156329.0 |
| heat repeat domain-containing protein | FE383_RS18195 | Not Available | Positive | 3729875 - 3730717 | 31875.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





