Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate trap transporter large permease yian | FE383_RS18105 | Not Available | Positive | 3708342 - 3709619 | 45371.0 |
| 2,3-diketo-l-gulonate trap transporter substrate-binding protein yiao | FE383_RS18110 | Not Available | Positive | 3709632 - 3710618 | 35972.1 |
| l-xylulokinase | FE383_RS18115 | Not Available | Positive | 3710622 - 3712118 | 55158.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | FE383_RS18120 | Not Available | Positive | 3712115 - 3712777 | 23446.1 |
| l-ribulose-5-phosphate 3-epimerase | FE383_RS18125 | Not Available | Positive | 3712770 - 3713630 | 32456.9 |
| l-ribulose-5-phosphate 4-epimerase | FE383_RS18130 | Not Available | Positive | 3713624 - 3714319 | 25562.3 |
| hypothetical protein | FE383_RS22555 | Not Available | Negative | 3714351 - 3714452 | 3996.7 |
| hypothetical protein | FE383_RS18135 | Not Available | Positive | 3714456 - 3714644 | 7103.24 |
| mipa/ompv family protein | FE383_RS18140 | Not Available | Negative | 3714666 - 3715406 | 27414.9 |
| lysr family transcriptional regulator | FE383_RS18145 | Not Available | Positive | 3715530 - 3716504 | 37276.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





