Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter subunit mdte | FE383_RS17755 | Not Available | Positive | 3622819 - 3623928 | 39309.4 |
| hypothetical protein | FE383_RS17760 | Not Available | Positive | 3623953 - 3627066 | 111396.0 |
| acid resistance transcriptional activator gadw | FE383_RS17765 | Not Available | Negative | 3627429 - 3628157 | 28030.0 |
| acid resistance transcriptional activator gadx | FE383_RS17770 | Not Available | Negative | 3628524 - 3629348 | 31564.3 |
| glutamate decarboxylase | FE383_RS17775 | Not Available | Negative | 3629718 - 3631118 | 52688.0 |
| cytochrome c peroxidase | FE383_RS17780 | Not Available | Negative | 3631329 - 3632726 | 51573.3 |
| alpha,alpha-trehalase | FE383_RS17785 | Not Available | Positive | 3633130 - 3634779 | 63700.1 |
| helix-turn-helix transcriptional regulator | FE383_RS17790 | Not Available | Negative | 3634830 - 3635432 | 22605.6 |
| lysr family transcriptional regulator | FE383_RS17795 | Not Available | Positive | 3635952 - 3636851 | 33331.6 |
| inner membrane protein yhjd | FE383_RS17800 | Not Available | Positive | 3636900 - 3637913 | 37913.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





