Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide/tripeptide permease dtpb | FE383_RS17655 | Not Available | Positive | 3604428 - 3605897 | 53578.4 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | FE383_RS17660 | Not Available | Negative | 3605946 - 3606698 | 26950.8 |
| oligopeptidase a | FE383_RS17665 | Not Available | Negative | 3606706 - 3608748 | 77187.4 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase | FE383_RS17670 | Not Available | Positive | 3608951 - 3609793 | 31943.6 |
| glutathione-disulfide reductase | FE383_RS17675 | Not Available | Positive | 3609865 - 3611217 | 48775.3 |
| damage-inducible type i toxin dinq | FE383_RS17680 | Not Available | Negative | 3611271 - 3611354 | 3021.06 |
| as(iii)-sensing metalloregulatory transcriptional repressor arsr | FE383_RS17685 | Not Available | Positive | 3612094 - 3612447 | 13253.3 |
| arsenite/antimonite:h(+) antiporter arsb | FE383_RS17690 | Not Available | Positive | 3612501 - 3613790 | 45500.2 |
| glutaredoxin-dependent arsenate reductase | FE383_RS17695 | Not Available | Positive | 3613803 - 3614228 | 15854.2 |
| hypothetical protein | FE383_RS17700 | Not Available | Positive | 3614857 - 3615603 | 28285.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





