Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | FE383_RS17420 | Not Available | Negative | 3550936 - 3551679 | 27411.1 |
| sn-glycerol 3-phosphate abc transporter atp binding protein ugpc | FE383_RS17425 | Not Available | Negative | 3551676 - 3552746 | 39526.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | FE383_RS17430 | Not Available | Negative | 3552748 - 3553593 | 31501.6 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | FE383_RS17435 | Not Available | Negative | 3553590 - 3554477 | 33265.6 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | FE383_RS17440 | Not Available | Negative | 3554575 - 3555891 | 48451.2 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | FE383_RS17445 | Not Available | Negative | 3556290 - 3557003 | 26311.9 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | FE383_RS17450 | Not Available | Negative | 3557005 - 3557772 | 28428.7 |
| branched chain amino acid abc transporter permease livm | FE383_RS17455 | Not Available | Negative | 3557769 - 3559046 | 46272.2 |
| high-affinity branched-chain amino acid abc transporter permease livh | FE383_RS17460 | Not Available | Negative | 3559043 - 3559969 | 32984.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | FE383_RS17465 | Not Available | Negative | 3560017 - 3561126 | 39380.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





