Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin 2,3-dioxygenase | FE383_RS17370 | Not Available | Negative | 3542516 - 3543211 | 26280.8 |
| oxidoreductase | FE383_RS17375 | Not Available | Negative | 3543334 - 3544371 | 38767.1 |
| n-acetyltransferase | FE383_RS17380 | Not Available | Positive | 3544704 - 3545192 | 18794.6 |
| hcp1 family type vi secretion system effector | FE383_RS17385 | Not Available | Positive | 3545429 - 3546607 | 44233.9 |
| yrha family protein | FE383_RS17390 | Not Available | Positive | 3546604 - 3547020 | 15951.2 |
| is1-like element is1a family transposase | FE383_RS17395 | Not Available | Positive | 3547049 - 3547746 | 26455.2 |
| protein yrhd | FE383_RS17400 | Not Available | Positive | 3547970 - 3548125 | 6027.24 |
| yrhb family protein | FE383_RS17405 | Not Available | Positive | 3548325 - 3548609 | 10613.4 |
| gamma-glutamyltransferase | FE383_RS17410 | Not Available | Negative | 3548647 - 3550389 | 61771.4 |
| duf2756 family protein | FE383_RS17415 | Not Available | Positive | 3550509 - 3550949 | 16624.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





