Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen phosphorylase | FE383_RS17320 | Not Available | Negative | 3527700 - 3530147 | 93177.7 |
| glycogen synthase glga | FE383_RS17325 | Not Available | Negative | 3530166 - 3531599 | 52825.4 |
| glucose-1-phosphate adenylyltransferase | FE383_RS17330 | Not Available | Negative | 3531599 - 3532894 | 48700.4 |
| glycogen debranching protein glgx | FE383_RS17335 | Not Available | Negative | 3532912 - 3534885 | 73580.6 |
| 1,4-alpha-glucan branching enzyme | FE383_RS17340 | Not Available | Negative | 3534882 - 3537068 | 84341.4 |
| aspartate-semialdehyde dehydrogenase | FE383_RS17345 | Not Available | Negative | 3537341 - 3538444 | 40020.2 |
| naat family transporter yhgn | FE383_RS17350 | Not Available | Positive | 3538637 - 3539230 | 21491.9 |
| gluconate transporter | FE383_RS17355 | Not Available | Negative | 3539287 - 3540627 | 46418.9 |
| gluconokinase | FE383_RS17360 | Not Available | Negative | 3540631 - 3541158 | 19544.4 |
| gluconate operon transcriptional repressor gntr | FE383_RS17365 | Not Available | Negative | 3541297 - 3542292 | 36424.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





