Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tex family protein | FE383_RS17220 | Not Available | Positive | 3500950 - 3503271 | 85124.7 |
| ferrous iron transporter a | FE383_RS17225 | Not Available | Positive | 3503728 - 3503955 | 8371.31 |
| fe(2+) transporter permease subunit feob | FE383_RS17230 | Not Available | Positive | 3503972 - 3506293 | 84478.7 |
| [fe-s]-dependent transcriptional repressor feoc | FE383_RS17235 | Not Available | Positive | 3506293 - 3506529 | 8660.66 |
| recombination-promoting nuclease rpna | FE383_RS17240 | Not Available | Positive | 3506732 - 3507610 | 33269.4 |
| pimeloyl-acp methyl ester esterase bioh | FE383_RS17245 | Not Available | Negative | 3507639 - 3508409 | 28506.6 |
| dna utilization protein gntx | FE383_RS17250 | Not Available | Positive | 3508447 - 3509130 | 25727.7 |
| fe-s biogenesis protein nfua | FE383_RS17255 | Not Available | Positive | 3509189 - 3509764 | 20998.9 |
| gluconate transporter | FE383_RS17260 | Not Available | Positive | 3510124 - 3511440 | 45969.6 |
| 4-alpha-glucanotransferase | FE383_RS17265 | Not Available | Negative | 3511551 - 3513635 | 78508.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





