Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhft family protein | FE383_RS17065 | Not Available | Negative | 3469597 - 3470901 | 46519.2 |
| duf2620 domain-containing protein | FE383_RS17070 | Not Available | Negative | 3470913 - 3471266 | 12479.5 |
| phosphotriesterase-related protein | FE383_RS17075 | Not Available | Negative | 3471277 - 3472155 | 32917.4 |
| phosphopentomutase | FE383_RS17080 | Not Available | Negative | 3472152 - 3473378 | 44562.2 |
| yhfx family plp-dependent enzyme | FE383_RS17085 | Not Available | Negative | 3473378 - 3474541 | 42296.8 |
| prd domain protein | FE383_RS17090 | Not Available | Negative | 3474625 - 3474987 | 13528.5 |
| gntr family transcriptional regulator yhfz | FE383_RS17095 | Not Available | Negative | 3475004 - 3475909 | 33506.4 |
| tryptophan--trna ligase | FE383_RS17105 | Not Available | Negative | 3476199 - 3477203 | 37439.9 |
| phosphoglycolate phosphatase | FE383_RS17110 | Not Available | Negative | 3477196 - 3477954 | 27390.7 |
| ribulose-phosphate 3-epimerase | FE383_RS17115 | Not Available | Negative | 3477947 - 3478624 | 24555.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





