Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase small subunit nird | FE383_RS17015 | Not Available | Positive | 3460116 - 3460442 | 12284.7 |
| nitrite transporter nirc | FE383_RS17020 | Not Available | Positive | 3460568 - 3461374 | 28564.1 |
| siroheme synthase cysg | FE383_RS17025 | Not Available | Positive | 3461393 - 3462766 | 49954.4 |
| yhfl family protein | FE383_RS17030 | Not Available | Positive | 3463013 - 3463180 | 5819.16 |
| fructoselysine/psicoselysine transporter | FE383_RS17035 | Not Available | Positive | 3463475 - 3464812 | 47579.2 |
| fructoselysine 6-phosphate deglycase | FE383_RS17040 | Not Available | Positive | 3464833 - 3465855 | 38571.3 |
| fructoselysine 3-epimerase | FE383_RS17045 | Not Available | Positive | 3465905 - 3466735 | 31170.7 |
| fructoselysine 6-kinase | FE383_RS17050 | Not Available | Positive | 3466732 - 3467517 | 28333.3 |
| dna-binding transcriptional regulator frlr | FE383_RS17055 | Not Available | Positive | 3467617 - 3468348 | 27822.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | FE383_RS17060 | Not Available | Negative | 3468500 - 3469585 | 38601.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





