Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | FE383_RS16965 | Not Available | Negative | 3448979 - 3449383 | 14517.6 |
| camp-activated global transcriptional regulator crp | FE383_RS16970 | Not Available | Positive | 3449685 - 3450317 | 23641.9 |
| yccs/yhfk family putative transporter | FE383_RS16975 | Not Available | Positive | 3450368 - 3452458 | 79503.7 |
| bifunctional acetylornithine/succinyldiaminopimelate transaminase | FE383_RS16980 | Not Available | Negative | 3452525 - 3453745 | 43769.5 |
| aminodeoxychorismate synthase component 2 | FE383_RS16985 | Not Available | Negative | 3453831 - 3454394 | 20773.1 |
| putative adenosine monophosphate-protein transferase fic | FE383_RS16990 | Not Available | Negative | 3454426 - 3455028 | 22961.4 |
| yhfg family protein | FE383_RS16995 | Not Available | Negative | 3455018 - 3455185 | 6599.0 |
| peptidylprolyl isomerase a | FE383_RS17000 | Not Available | Negative | 3455290 - 3455862 | 20432.5 |
| mfs transporter tsga | FE383_RS17005 | Not Available | Positive | 3456133 - 3457314 | 43169.0 |
| nadph-nitrite reductase large subunit | FE383_RS17010 | Not Available | Positive | 3457576 - 3460119 | 93126.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





