Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine phosphoribosyltransferase | FE383_RS00610 | Not Available | Positive | 141430 - 141966 | 20116.4 |
| carbonate dehydratase | FE383_RS00615 | Not Available | Negative | 142007 - 142669 | 25098.2 |
| abc transporter atp-binding protein | FE383_RS00620 | Not Available | Positive | 142778 - 143704 | 34649.2 |
| abc transporter permease | FE383_RS00625 | Not Available | Positive | 143701 - 144471 | 28483.9 |
| pts sugar transporter subunit iia | FE383_RS00630 | Not Available | Positive | 144576 - 145016 | 16541.0 |
| polysaccharide deacetylase family protein | FE383_RS00635 | Not Available | Positive | 145080 - 146309 | 46317.7 |
| aspartate 1-decarboxylase | FE383_RS00640 | Not Available | Negative | 146313 - 146693 | 13834.5 |
| recombination-promoting nuclease rpnc | FE383_RS00645 | Not Available | Positive | 146967 - 147869 | 34608.9 |
| pantoate--beta-alanine ligase | FE383_RS00650 | Not Available | Negative | 147943 - 148794 | 31599.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | FE383_RS00655 | Not Available | Negative | 148806 - 149600 | 28239.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





