Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | FE383_RS16765 | Not Available | Negative | 3414202 - 3415023 | 29862.3 |
| 50s ribosomal protein l23 | FE383_RS16770 | Not Available | Negative | 3415041 - 3415343 | 11199.8 |
| 50s ribosomal protein l4 | FE383_RS16775 | Not Available | Negative | 3415340 - 3415945 | 22087.8 |
| 50s ribosomal protein l3 | FE383_RS16780 | Not Available | Negative | 3415956 - 3416585 | 22244.8 |
| 30s ribosomal protein s10 | FE383_RS16785 | Not Available | Negative | 3416618 - 3416929 | 11736.3 |
| putative general secretion pathway protein gspb | FE383_RS16790 | Not Available | Negative | 3417167 - 3417586 | 15876.8 |
| type ii secretion system protein gspa | FE383_RS16795 | Not Available | Negative | 3417588 - 3419057 | 55301.1 |
| type ii secretion system protein gspc | FE383_RS16800 | Not Available | Positive | 3419161 - 3419958 | 29375.1 |
| type ii secretion system secretin gspd | FE383_RS16805 | Not Available | Positive | 3419942 - 3421894 | 70702.2 |
| type ii secretion system atpase gspe | FE383_RS16810 | Not Available | Positive | 3421904 - 3423385 | 54613.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





