Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | FE383_RS16615 | Not Available | Positive | 3397873 - 3398820 | 34170.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | FE383_RS16620 | Not Available | Positive | 3398866 - 3400155 | 48350.3 |
| trk system potassium transporter trka | FE383_RS16625 | Not Available | Positive | 3400177 - 3401553 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | FE383_RS16630 | Not Available | Positive | 3401683 - 3402093 | 14957.7 |
| alternative ribosome-rescue factor arfa | FE383_RS16635 | Not Available | Negative | 3402090 - 3402308 | 8171.86 |
| zn(2+)-responsive transcriptional regulator | FE383_RS16640 | Not Available | Negative | 3402364 - 3402789 | 16180.4 |
| duf1992 domain-containing protein | FE383_RS16645 | Not Available | Negative | 3402800 - 3403168 | 13945.5 |
| 50s ribosomal protein l17 | FE383_RS16650 | Not Available | Negative | 3403275 - 3403658 | 14365.4 |
| dna-directed rna polymerase subunit alpha | FE383_RS16655 | Not Available | Negative | 3403699 - 3404688 | 36513.9 |
| 30s ribosomal protein s4 | FE383_RS16660 | Not Available | Negative | 3404714 - 3405334 | 23470.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





