Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane-stress sensor serine endopeptidase degs | FE383_RS16360 | Not Available | Positive | 3345879 - 3346946 | 37583.4 |
| malate dehydrogenase | FE383_RS16365 | Not Available | Negative | 3347009 - 3347947 | 32339.2 |
| transcriptional regulator argr | FE383_RS16370 | Not Available | Positive | 3348382 - 3348852 | 16995.5 |
| peroxide/acid stress response protein yhcn | FE383_RS16375 | Not Available | Positive | 3349217 - 3349480 | 9196.89 |
| barstar family protein | FE383_RS16380 | Not Available | Negative | 3349536 - 3349808 | 10796.7 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | FE383_RS16385 | Not Available | Negative | 3349900 - 3351867 | 73591.9 |
| p-hydroxybenzoic acid efflux pump subunit aaea | FE383_RS16390 | Not Available | Negative | 3351873 - 3352805 | 34776.5 |
| p-hydroxybenzoic acid efflux pump operon protein aaex | FE383_RS16395 | Not Available | Negative | 3352813 - 3353016 | 7847.01 |
| hth-type transcriptional activator aaer | FE383_RS16400 | Not Available | Positive | 3353199 - 3354128 | 34518.1 |
| metalloprotease tldd | FE383_RS16405 | Not Available | Negative | 3354262 - 3355707 | 51367.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





