Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | FE383_RS15915 | Not Available | Positive | 3259107 - 3259502 | 14798.5 |
| dnaa initiator-associating protein diaa | FE383_RS15920 | Not Available | Positive | 3259522 - 3260112 | 21107.3 |
| division/outer membrane stress-associated lipid-binding lipoprotein | FE383_RS15925 | Not Available | Positive | 3260122 - 3260697 | 20029.1 |
| permease | FE383_RS15930 | Not Available | Negative | 3260811 - 3261851 | 37258.9 |
| nad(p)h-binding protein | FE383_RS15935 | Not Available | Negative | 3261924 - 3262559 | 23199.3 |
| protein/nucleic acid deglycase | FE383_RS15940 | Not Available | Positive | 3262687 - 3263205 | 18859.4 |
| yhbp family protein | FE383_RS15945 | Not Available | Negative | 3263185 - 3263628 | 16777.2 |
| dna damage response exodeoxyribonuclease yhbq | FE383_RS15950 | Not Available | Positive | 3263679 - 3263981 | 11270.6 |
| gnat family n-acetyltransferase | FE383_RS15955 | Not Available | Negative | 3263968 - 3264471 | 18534.8 |
| scp2 domain-containing protein | FE383_RS15960 | Not Available | Negative | 3264465 - 3264989 | 19673.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





