Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein transport protein hofc | FE383_RS00515 | Not Available | Negative | 114521 - 115723 | 44453.2 |
| type ii secretion system protein gspe | FE383_RS00520 | Not Available | Negative | 115713 - 117098 | 50618.4 |
| prepilin peptidase-dependent pilin | FE383_RS00525 | Not Available | Negative | 117108 - 117548 | 15622.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | FE383_RS00530 | Not Available | Negative | 117751 - 118644 | 32764.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | FE383_RS00535 | Not Available | Positive | 118732 - 119283 | 20537.2 |
| beta-lactamase regulator ampe | FE383_RS00540 | Not Available | Positive | 119280 - 120134 | 32123.9 |
| aromatic amino acid transporter arop | FE383_RS00545 | Not Available | Negative | 120177 - 121550 | 49693.1 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | FE383_RS00550 | Not Available | Positive | 122091 - 122855 | 29427.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | FE383_RS00555 | Not Available | Positive | 123016 - 125679 | 99674.1 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | FE383_RS00560 | Not Available | Positive | 125694 - 127586 | 66099.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





