Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vancomycin high temperature exclusion protein | FE383_RS15620 | Not Available | Positive | 3200253 - 3200945 | 25481.4 |
| gfo/idh/moca family protein | FE383_RS15625 | Not Available | Positive | 3201024 - 3202010 | 36216.3 |
| terc family membrane protein alx | FE383_RS15630 | Not Available | Positive | 3202293 - 3203258 | 35911.1 |
| serine/threonine transporter sstt | FE383_RS15635 | Not Available | Positive | 3203657 - 3204901 | 43480.4 |
| ygjv family protein | FE383_RS15640 | Not Available | Negative | 3204906 - 3205457 | 20513.7 |
| altronate dehydratase | FE383_RS15645 | Not Available | Negative | 3205540 - 3207027 | 54096.2 |
| glucuronate isomerase | FE383_RS15650 | Not Available | Negative | 3207042 - 3208454 | 53990.1 |
| hexuronate transporter exut | FE383_RS15655 | Not Available | Positive | 3208937 - 3210235 | 46894.0 |
| transcriptional regulator exur | FE383_RS15660 | Not Available | Positive | 3210365 - 3211141 | 29837.3 |
| protein yqim | FE383_RS22525 | Not Available | Positive | 3211381 - 3211464 | 3305.08 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





