Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase subunit alpha | FE383_RS15570 | Not Available | Positive | 3186346 - 3189438 | 117885.0 |
| beta-galactosidase subunit beta | FE383_RS15575 | Not Available | Positive | 3189435 - 3189884 | 17457.6 |
| amino acid permease | FE383_RS15580 | Not Available | Positive | 3189947 - 3191380 | 52149.6 |
| protein ygjj | FE383_RS15585 | Not Available | Positive | 3191514 - 3192584 | 40101.5 |
| alpha-glucosidase | FE383_RS15590 | Not Available | Positive | 3192601 - 3194952 | 88325.6 |
| nadph-dependent 2,4-dienoyl-coa reductase | FE383_RS15595 | Not Available | Positive | 3195378 - 3197396 | 72682.5 |
| type ii toxin-antitoxin system antitoxin higa | FE383_RS15600 | Not Available | Negative | 3197441 - 3197857 | 14996.3 |
| type ii toxin-antitoxin system toxin higb | FE383_RS15605 | Not Available | Negative | 3197854 - 3198168 | 12103.7 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | FE383_RS15610 | Not Available | Negative | 3198452 - 3199588 | 42333.8 |
| m48 family metallopeptidase | FE383_RS15615 | Not Available | Positive | 3199673 - 3200176 | 19483.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





