Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | FE383_RS15520 | Not Available | Positive | 3174820 - 3176565 | 65568.5 |
| rna polymerase sigma factor rpod | FE383_RS15525 | Not Available | Positive | 3176760 - 3178601 | 70241.3 |
| g/u mismatch-specific dna glycosylase | FE383_RS15530 | Not Available | Negative | 3178680 - 3179186 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 3179311 - 3179386 | Not Available |
| nadph-dependent ferric chelate reductase nfef | FE383_RS15540 | Not Available | Negative | 3179440 - 3180204 | 28873.1 |
| dna-binding transcriptional regulator nfer | FE383_RS15545 | Not Available | Positive | 3180492 - 3181115 | 23402.7 |
| aerotaxis sensor receptor aer | FE383_RS15550 | Not Available | Negative | 3181269 - 3182789 | 55069.0 |
| putrescine aminotransferase | FE383_RS15555 | Not Available | Positive | 3183207 - 3184586 | 49664.3 |
| pp_03052 | FE383_RS15560 | Not Available | Negative | 3184628 - 3184960 | Not Available |
| transcriptional regulator ebgr | FE383_RS15565 | Not Available | Positive | 3185179 - 3186162 | 36212.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





