Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | FE383_RS15420 | Not Available | Positive | 3154345 - 3155409 | 38556.8 |
| cell surface composition regulator glgs | FE383_RS15425 | Not Available | Negative | 3155452 - 3155652 | 7892.31 |
| ob-fold-containig protein | FE383_RS15430 | Not Available | Positive | 3155921 - 3156550 | 23088.5 |
| flotillin family protein | FE383_RS15435 | Not Available | Positive | 3156577 - 3158238 | 60703.2 |
| type i toxin-antitoxin system ibs family toxin | FE383_RS15440 | Not Available | Positive | 3158479 - 3158538 | 2150.99 |
| type i toxin-antitoxin system toxin ibse | FE383_RS15445 | Not Available | Positive | 3158854 - 3158913 | 2207.06 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | FE383_RS15450 | Not Available | Negative | 3159033 - 3160466 | 51053.6 |
| bifunctional | FE383_RS15455 | Not Available | Negative | 3160514 - 3163354 | 108425.0 |
| inorganic triphosphatase | FE383_RS15460 | Not Available | Negative | 3163377 - 3164678 | 48391.6 |
| tigr04211 family sh3 domain-containing protein | FE383_RS15465 | Not Available | Positive | 3164920 - 3165540 | 23077.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





