Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb system transport protein exbd | FE383_RS15225 | Not Available | Negative | 3114531 - 3114956 | 15527.9 |
| tol-pal system-associated acyl-coa thioesterase | FE383_RS15230 | Not Available | Negative | 3114963 - 3115697 | 26289.0 |
| cystathionine beta-lyase | FE383_RS15235 | Not Available | Positive | 3115949 - 3117136 | 43214.8 |
| deda family general envelope maintenance protein yghb | FE383_RS15240 | Not Available | Positive | 3117276 - 3117935 | 24135.3 |
| dna-binding transcriptional regulator yqhc | FE383_RS15245 | Not Available | Negative | 3117975 - 3118874 | 33745.1 |
| alcohol dehydrogenase | FE383_RS15250 | Not Available | Positive | 3119068 - 3120231 | 42099.4 |
| 2,5-didehydrogluconate reductase dkga | FE383_RS15255 | Not Available | Positive | 3120336 - 3121163 | 31111.4 |
| ybjp/yqhg family protein | FE383_RS15260 | Not Available | Positive | 3121363 - 3122289 | 34985.0 |
| lipoprotein yqhh | FE383_RS15265 | Not Available | Positive | 3122340 - 3122597 | 9513.58 |
| ygiq family radical sam protein | FE383_RS15270 | Not Available | Negative | 3122640 - 3124859 | 83482.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





