Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hyad/hybd family hydrogenase maturation endopeptidase | FE383_RS15175 | Not Available | Negative | 3104505 - 3104999 | 17751.8 |
| hydrogenase 2 large subunit | FE383_RS15180 | Not Available | Negative | 3104999 - 3106702 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | FE383_RS15185 | Not Available | Negative | 3106699 - 3107877 | 43604.6 |
| hydrogenase 2 operon protein hyba | FE383_RS15190 | Not Available | Negative | 3107867 - 3108853 | 36033.0 |
| hydrogenase 2 small subunit | FE383_RS15195 | Not Available | Negative | 3108856 - 3109974 | 39654.3 |
| duf2623 family protein yghw | FE383_RS15200 | Not Available | Negative | 3110163 - 3110450 | 10946.1 |
| hypothetical protein | FE383_RS15205 | Not Available | Negative | 3110569 - 3111453 | 31578.2 |
| l-glyceraldehyde 3-phosphate reductase | FE383_RS15210 | Not Available | Positive | 3111610 - 3112650 | 38834.4 |
| tigr00645 family protein | FE383_RS15215 | Not Available | Negative | 3112690 - 3113184 | 18642.3 |
| nadp(+)-dependent aldehyde reductase | FE383_RS15220 | Not Available | Positive | 3113375 - 3114259 | 31489.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





