Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate permease glca | FE383_RS15080 | Not Available | Negative | 3083310 - 3084992 | 58923.7 |
| malate synthase g | FE383_RS15085 | Not Available | Negative | 3085347 - 3087518 | 80493.2 |
| glcg family protein | FE383_RS15090 | Not Available | Negative | 3087540 - 3087944 | 13737.5 |
| glycolate oxidase subunit glcf | FE383_RS15095 | Not Available | Negative | 3087949 - 3089172 | 45112.8 |
| glycolate oxidase subunit glce | FE383_RS15100 | Not Available | Negative | 3089183 - 3090235 | 38363.3 |
| glycolate oxidase subunit glcd | FE383_RS15105 | Not Available | Negative | 3090235 - 3091734 | 53814.9 |
| transcriptional regulator glcc | FE383_RS15110 | Not Available | Positive | 3091985 - 3092749 | 28827.9 |
| protein ygho | FE383_RS15115 | Not Available | Negative | 3092756 - 3093892 | 43216.4 |
| is5-like element is5 family transposase | FE383_RS15120 | Not Available | Positive | 3093927 - 3094907 | 37853.6 |
| hypothetical protein | FE383_RS15125 | Not Available | Negative | 3095057 - 3096121 | 38517.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





