Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | FE383_RS15035 | Not Available | Negative | 3070733 - 3072868 | 79420.5 |
| protein yqgh | FE383_RS22520 | Not Available | Negative | 3073030 - 3073113 | 3188.1 |
| duf554 domain-containing protein | FE383_RS15040 | Not Available | Positive | 3073266 - 3073973 | 24615.5 |
| Trna-phe | Not Available | Not Available | Positive | 3074079 - 3074154 | Not Available |
| gspm family type ii secretion system protein yghd | FE383_RS15050 | Not Available | Negative | 3074303 - 3074839 | 20425.7 |
| hypothetical protein | FE383_RS15055 | Not Available | Negative | 3074841 - 3075806 | 35908.5 |
| type ii secretion system protein gspc | FE383_RS15060 | Not Available | Negative | 3075767 - 3076762 | 37351.3 |
| type ii secretion system pilot lipoprotein gsps-beta | FE383_RS15065 | Not Available | Negative | 3076780 - 3077190 | 14670.8 |
| prepilin peptidase pppa | FE383_RS15070 | Not Available | Negative | 3077256 - 3078065 | 29467.8 |
| lipoprotein metalloprotease ssle | FE383_RS15075 | Not Available | Negative | 3078263 - 3082825 | 167255.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





