Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent 2-octaprenylphenol hydroxylase | FE383_RS14750 | Not Available | Negative | 3014828 - 3016030 | 44247.2 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | FE383_RS14755 | Not Available | Negative | 3016053 - 3017231 | 42260.7 |
| xaa-pro aminopeptidase | FE383_RS14760 | Not Available | Negative | 3017228 - 3018553 | 49818.3 |
| upf0149 family protein ygfb | FE383_RS14765 | Not Available | Negative | 3018579 - 3019157 | 21230.8 |
| cell division protein zapa | FE383_RS14770 | Not Available | Positive | 3019325 - 3019654 | 12594.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3019696 - 3019879 | Not Available |
| 5-formyltetrahydrofolate cyclo-ligase | FE383_RS14780 | Not Available | Positive | 3019900 - 3020502 | 23242.3 |
| type i toxin-antitoxin system toxin ibsc | FE383_RS14785 | Not Available | Negative | 3020603 - 3020662 | 2209.04 |
| phosphoglycerate dehydrogenase | FE383_RS14790 | Not Available | Negative | 3020891 - 3022123 | 44178.4 |
| ribose-5-phosphate isomerase rpia | FE383_RS14795 | Not Available | Negative | 3022379 - 3023038 | 22861.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





