Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yqfg | FE383_RS14650 | Not Available | Positive | 2996530 - 2996655 | 4791.29 |
| protein yqfh | FE383_RS14655 | Not Available | Negative | 2996652 - 2996723 | 2617.29 |
| isopentenyl-diphosphate delta-isomerase | FE383_RS14660 | Not Available | Positive | 2996778 - 2997326 | 20509.3 |
| lysine--trna ligase | FE383_RS14665 | Not Available | Negative | 2997370 - 2998887 | 57606.8 |
| peptide chain release factor 2 | FE383_RS14670 | Not Available | Negative | 2998897 - 2999995 | 41222.9 |
| single-stranded-dna-specific exonuclease recj | FE383_RS14675 | Not Available | Negative | 3000086 - 3001819 | 63392.7 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | FE383_RS14680 | Not Available | Negative | 3001825 - 3002535 | 25623.1 |
| site-specific tyrosine recombinase xerd | FE383_RS14685 | Not Available | Negative | 3002560 - 3003456 | 34248.4 |
| flavodoxin fldb | FE383_RS14690 | Not Available | Positive | 3003568 - 3004089 | 19701.2 |
| protein ygfx | FE383_RS14695 | Not Available | Negative | 3004129 - 3004536 | 16065.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





