Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | FE383_RS14550 | Not Available | Positive | 2967202 - 2967681 | 16922.7 |
| sigma-54 interaction domain-containing protein | FE383_RS14555 | Not Available | Negative | 2967721 - 2969499 | 66100.0 |
| knotted carbamoyltransferase ygew | FE383_RS14560 | Not Available | Positive | 2969978 - 2971165 | 44058.7 |
| diaminopropionate ammonia-lyase | FE383_RS14565 | Not Available | Positive | 2971223 - 2972419 | 43330.1 |
| ygey family selenium metabolism-linked hydrolase | FE383_RS14570 | Not Available | Positive | 2972477 - 2973688 | 44806.4 |
| d-phenylhydantoinase | FE383_RS14575 | Not Available | Positive | 2973741 - 2975126 | 51028.1 |
| carbamate kinase | FE383_RS14580 | Not Available | Positive | 2975174 - 2976106 | 33072.9 |
| selenium-dependent molybdenum cofactor biosynthesis protein yqeb | FE383_RS14585 | Not Available | Negative | 2976327 - 2977952 | 57653.4 |
| selenium cofactor biosynthesis protein yqec | FE383_RS14590 | Not Available | Negative | 2978000 - 2978770 | 28105.0 |
| molybdenum cofactor cytidylyltransferase | FE383_RS14595 | Not Available | Positive | 2978873 - 2979451 | 21515.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





