Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | FE383_RS14345 | Not Available | Negative | 2928074 - 2928868 | 30481.4 |
| prolipoprotein diacylglyceryl transferase | FE383_RS14350 | Not Available | Negative | 2928875 - 2929750 | 33109.9 |
| phosphoenolpyruvate--protein phosphotransferase | FE383_RS14355 | Not Available | Negative | 2929901 - 2932147 | 83720.7 |
| rna pyrophosphohydrolase | FE383_RS14360 | Not Available | Negative | 2932160 - 2932690 | 20796.0 |
| protein ygdt | FE383_RS22765 | Not Available | Negative | 2933043 - 2933189 | 5231.2 |
| dna mismatch repair endonuclease muth | FE383_RS14370 | Not Available | Positive | 2933375 - 2934064 | 25528.9 |
| terc family protein | FE383_RS14375 | Not Available | Positive | 2934133 - 2934846 | 26159.0 |
| lipoprotein ygdr | FE383_RS14380 | Not Available | Positive | 2934984 - 2935202 | 7877.35 |
| nadp(h)-dependent aldo-keto reductase | FE383_RS14385 | Not Available | Positive | 2935310 - 2936350 | 38501.7 |
| lysophospholipid transporter lplt | FE383_RS14390 | Not Available | Negative | 2936382 - 2937575 | 41658.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





