Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf423 domain-containing protein | FE383_RS14245 | Not Available | Negative | 2904949 - 2905344 | 14334.0 |
| glycine cleavage system transcriptional regulator gcva | FE383_RS14250 | Not Available | Negative | 2905363 - 2906280 | 34403.4 |
| ygdi/ygdr family lipoprotein | FE383_RS14255 | Not Available | Negative | 2906631 - 2906858 | 8174.67 |
| cysteine desulfurase csda | FE383_RS14260 | Not Available | Positive | 2907050 - 2908255 | 43236.6 |
| cysteine desulfurase sulfur acceptor subunit csde | FE383_RS14265 | Not Available | Positive | 2908255 - 2908698 | 15941.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | FE383_RS14270 | Not Available | Negative | 2908749 - 2909555 | 28563.6 |
| murein transglycosylase a | FE383_RS14275 | Not Available | Negative | 2909794 - 2910891 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 2911100 - 2911176 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2911210 - 2911286 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2911320 - 2911396 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





