Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase ii | FE383_RS14195 | Not Available | Positive | 2893289 - 2894656 | 48755.8 |
| flap endonuclease xni | FE383_RS14200 | Not Available | Positive | 2894768 - 2895523 | 28167.7 |
| lactaldehyde reductase | FE383_RS14205 | Not Available | Negative | 2895578 - 2896726 | 40515.7 |
| l-fuculose-phosphate aldolase | FE383_RS14210 | Not Available | Negative | 2896754 - 2897401 | 23776.7 |
| l-fucose:h+ symporter permease | FE383_RS14215 | Not Available | Positive | 2897948 - 2899264 | 47547.6 |
| l-fucose isomerase | FE383_RS14220 | Not Available | Positive | 2899297 - 2901072 | 64980.3 |
| l-fuculokinase | FE383_RS14225 | Not Available | Positive | 2901181 - 2902599 | 52261.7 |
| l-fucose mutarotase | FE383_RS14230 | Not Available | Positive | 2902601 - 2903023 | 15474.0 |
| l-fucose operon activator | FE383_RS14235 | Not Available | Positive | 2903081 - 2903812 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | FE383_RS14240 | Not Available | Negative | 2903856 - 2904956 | 41907.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





