Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | FE383_RS14145 | Not Available | Negative | 2881758 - 2883098 | 49143.9 |
| enolase c-terminal domain-like protein | FE383_RS14150 | Not Available | Negative | 2883119 - 2884459 | 48852.3 |
| galactarate/glucarate/glycerate transporter gudp | FE383_RS14155 | Not Available | Negative | 2884461 - 2885813 | 49145.0 |
| flavodoxin | FE383_RS14160 | Not Available | Negative | 2886248 - 2886697 | 16275.1 |
| trna pseudouridine(65) synthase truc | FE383_RS14165 | Not Available | Negative | 2886715 - 2887497 | 29667.5 |
| yqcc family protein | FE383_RS14170 | Not Available | Negative | 2887497 - 2887826 | 12787.2 |
| secy-interacting protein | FE383_RS14175 | Not Available | Negative | 2888448 - 2888993 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | FE383_RS14180 | Not Available | Positive | 2889061 - 2889909 | 32589.3 |
| nucleotide 5'-monophosphate nucleosidase ppnn | FE383_RS14185 | Not Available | Positive | 2890021 - 2891385 | 50975.0 |
| haaap family serine/threonine permease sdac | FE383_RS14190 | Not Available | Positive | 2891942 - 2893231 | 46909.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





