Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cas5/casd | FE383_RS13990 | Not Available | Negative | 2844087 - 2844761 | 25210.2 |
| type i-e crispr-associated protein cas7/cse4/casc | FE383_RS13995 | Not Available | Negative | 2844764 - 2845855 | 40027.8 |
| type i-e crispr-associated protein cse2/casb | FE383_RS14000 | Not Available | Negative | 2845868 - 2846350 | 18702.6 |
| type i-e crispr-associated protein cse1/casa | FE383_RS14005 | Not Available | Negative | 2846343 - 2847851 | 55904.4 |
| crispr-associated helicase/endonuclease cas3 | FE383_RS14010 | Not Available | Negative | 2848266 - 2850932 | 100550.0 |
| phosphoadenosine phosphosulfate reductase | FE383_RS14020 | Not Available | Negative | 2851291 - 2852025 | 27977.3 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | FE383_RS14025 | Not Available | Negative | 2852100 - 2853812 | 64001.8 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | FE383_RS14030 | Not Available | Negative | 2853812 - 2855611 | 66273.4 |
| 6-carboxytetrahydropterin synthase qued | FE383_RS14035 | Not Available | Positive | 2855930 - 2856292 | 13642.4 |
| fad-dependent oxidoreductase | FE383_RS14040 | Not Available | Positive | 2856370 - 2857641 | 46395.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





