Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase assembly protein hych | FE383_RS13790 | Not Available | Negative | 2806749 - 2807159 | 15465.5 |
| formate hydrogenlyase subunit hycg | FE383_RS13795 | Not Available | Negative | 2807156 - 2807923 | 28000.8 |
| formate hydrogenlyase subunit hycf | FE383_RS13800 | Not Available | Negative | 2807923 - 2808465 | 20310.4 |
| formate hydrogenlyase subunit hyce | FE383_RS13805 | Not Available | Negative | 2808475 - 2810184 | 64984.1 |
| formate hydrogenlyase subunit hycd | FE383_RS13810 | Not Available | Negative | 2810202 - 2811125 | 33031.4 |
| formate hydrogenlyase subunit 3 | FE383_RS13815 | Not Available | Negative | 2811128 - 2812954 | 64081.1 |
| formate hydrogenlyase subunit hycb | FE383_RS13820 | Not Available | Negative | 2812951 - 2813562 | 21874.4 |
| formate hydrogenlyase regulator hyca | FE383_RS13825 | Not Available | Negative | 2813687 - 2814148 | 17627.9 |
| hydrogenase maturation nickel metallochaperone hypa | FE383_RS13835 | Not Available | Positive | 2814360 - 2814710 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | FE383_RS13840 | Not Available | Positive | 2814714 - 2815586 | 31566.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





