Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline abc transporter atp-binding protein prov | FE383_RS13590 | Not Available | Positive | 2768563 - 2769765 | 44165.5 |
| glycine betaine/l-proline abc transporter permease prow | FE383_RS13595 | Not Available | Positive | 2769758 - 2770822 | 37622.1 |
| glycine betaine/l-proline abc transporter substrate-binding protein prox | FE383_RS13600 | Not Available | Positive | 2770880 - 2771872 | 36024.4 |
| hypothetical protein | FE383_RS13605 | Not Available | Positive | 2772064 - 2773241 | 43107.2 |
| l-valine exporter subunit ygaz | FE383_RS13610 | Not Available | Positive | 2773365 - 2774102 | 26109.1 |
| l-valine transporter subunit ygah | FE383_RS13615 | Not Available | Positive | 2774092 - 2774427 | 12084.3 |
| multidrug efflux transporter emrab transcriptional repressor emrr | FE383_RS13620 | Not Available | Positive | 2774518 - 2775048 | 20564.7 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | FE383_RS13625 | Not Available | Positive | 2775175 - 2776347 | 42738.6 |
| multidrug efflux mfs transporter permease subunit emrb | FE383_RS13630 | Not Available | Positive | 2776364 - 2777902 | 55627.7 |
| s-ribosylhomocysteine lyase | FE383_RS13635 | Not Available | Negative | 2777966 - 2778481 | 19417.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





