Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2749525 - 2749600 | Not Available |
| hypothetical protein | FE383_RS22385 | Not Available | Positive | 2750145 - 2752397 | 84672.6 |
| glutarate dioxygenase glah | FE383_RS13500 | Not Available | Positive | 2752733 - 2753710 | 37362.5 |
| l-2-hydroxyglutarate oxidase | FE383_RS13505 | Not Available | Positive | 2753730 - 2754998 | 46084.6 |
| nadp-dependent succinate-semialdehyde dehydrogenase | FE383_RS13510 | Not Available | Positive | 2755021 - 2756469 | 51723.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | FE383_RS13515 | Not Available | Positive | 2756483 - 2757763 | 45777.3 |
| gaba permease | FE383_RS13520 | Not Available | Positive | 2758001 - 2759401 | 51083.1 |
| dna-binding transcriptional regulator csir | FE383_RS13525 | Not Available | Positive | 2759422 - 2760084 | 24992.3 |
| potassium binding protein kbp | FE383_RS13530 | Not Available | Negative | 2760085 - 2760534 | 16064.0 |
| yqae/pmp3 family membrane protein | FE383_RS13535 | Not Available | Negative | 2760618 - 2760776 | 5865.57 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





