Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin rnlb | FE383_RS13385 | Not Available | Positive | 2730747 - 2731118 | 13665.5 |
| gtpase family protein | FE383_RS13390 | Not Available | Positive | 2731474 - 2732337 | 32096.0 |
| duf932 domain-containing protein | FE383_RS13395 | Not Available | Positive | 2732429 - 2733250 | 31256.5 |
| wyl domain-containing protein | FE383_RS13400 | Not Available | Positive | 2733467 - 2734168 | 26607.6 |
| protein ypjk | FE383_RS13405 | Not Available | Positive | 2734209 - 2734445 | 7703.95 |
| yfjs/yafy family lipoprotein | FE383_RS13410 | Not Available | Positive | 2734445 - 2734888 | 16735.8 |
| protein yfjt | FE383_RS13415 | Not Available | Positive | 2734912 - 2735379 | 17100.1 |
| hypothetical protein | FE383_RS22640 | Not Available | Negative | 2735766 - 2735918 | 5785.93 |
| hypothetical protein | FE383_RS13425 | Not Available | Negative | 2735931 - 2736940 | 36712.6 |
| protein yfjw | FE383_RS13430 | Not Available | Positive | 2737082 - 2738785 | 64200.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





