Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS00270 | Not Available | Negative | 59295 - 59473 | 6243.45 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | FE383_RS00275 | Not Available | Negative | 59686 - 60345 | 24862.1 |
| rna polymerase-associated protein rapa | FE383_RS00280 | Not Available | Negative | 60357 - 63263 | 109775.0 |
| dna polymerase ii | FE383_RS00285 | Not Available | Negative | 63428 - 65779 | 90129.7 |
| l-ribulose-5-phosphate 4-epimerase | FE383_RS00290 | Not Available | Negative | 65854 - 66549 | 25520.3 |
| l-arabinose isomerase | FE383_RS00295 | Not Available | Negative | 66834 - 68336 | 56077.2 |
| ribulokinase | FE383_RS00300 | Not Available | Negative | 68347 - 70047 | 61092.6 |
| arabinose operon transcriptional regulator arac | FE383_RS00305 | Not Available | Positive | 70386 - 71264 | 33385.8 |
| deda family protein | FE383_RS00310 | Not Available | Positive | 71350 - 72114 | 28245.8 |
| thiamine abc transporter atp-binding protein thiq | FE383_RS00315 | Not Available | Negative | 72228 - 72926 | 25000.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





