Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 2690044 - 2692947 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2693132 - 2693207 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2693379 - 2694920 | Not Available |
| atp-dependent chaperone clpb | FE383_RS13200 | Not Available | Negative | 2695363 - 2697936 | 95590.8 |
| purine nucleoside phosphorylase yfih | FE383_RS13205 | Not Available | Negative | 2698066 - 2698797 | 26340.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | FE383_RS13210 | Not Available | Negative | 2698794 - 2699774 | 37123.9 |
| outer membrane protein assembly factor bamd | FE383_RS13215 | Not Available | Positive | 2699909 - 2700646 | 27830.9 |
| ribosome-associated translation inhibitor raia | FE383_RS13220 | Not Available | Positive | 2700917 - 2701258 | 12785.3 |
| phe operon leader peptide | FE383_RS13225 | Not Available | Positive | 2701362 - 2701409 | 1924.41 |
| bifunctional chorismate mutase/prephenate dehydratase | FE383_RS13230 | Not Available | Positive | 2701508 - 2702668 | 43113.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





