Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autonomous glycyl radical cofactor grca | FE383_RS13135 | Not Available | Negative | 2679829 - 2680212 | 14285.0 |
| uracil-dna glycosylase | FE383_RS13140 | Not Available | Positive | 2680517 - 2681206 | 25694.7 |
| trna/rrna methyltransferase | FE383_RS13145 | Not Available | Negative | 2681254 - 2682291 | 37786.5 |
| thioredoxin trxc | FE383_RS13150 | Not Available | Positive | 2682498 - 2682917 | 15555.6 |
| pp_02586 | FE383_RS13155 | Not Available | Positive | 2682986 - 2683684 | Not Available |
| peptidyl-lysine n-acetyltransferase patz | FE383_RS13160 | Not Available | Positive | 2683716 - 2686376 | 97993.2 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | FE383_RS13165 | Not Available | Positive | 2686490 - 2687845 | 52804.8 |
| yfim family lipoprotein | FE383_RS13170 | Not Available | Positive | 2687891 - 2688214 | 11805.9 |
| alpha-ketoglutarate permease | FE383_RS13175 | Not Available | Negative | 2688211 - 2689509 | 47055.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2689834 - 2689949 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





