Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soxr-reducing system protein rsec | FE383_RS13085 | Not Available | Negative | 2671085 - 2671564 | 16640.3 |
| sigma-e factor regulatory protein rseb | FE383_RS13090 | Not Available | Negative | 2671561 - 2672517 | 35751.8 |
| anti-sigma-e factor rsea | FE383_RS13095 | Not Available | Negative | 2672517 - 2673167 | 24322.8 |
| rna polymerase sigma factor rpoe | FE383_RS13100 | Not Available | Negative | 2673200 - 2673775 | 21697.0 |
| rpoe leader peptide rsed | FE383_RS13105 | Not Available | Negative | 2673772 - 2673927 | 6229.83 |
| l-aspartate oxidase | FE383_RS13110 | Not Available | Positive | 2674183 - 2675805 | 60340.9 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | FE383_RS13115 | Not Available | Negative | 2675790 - 2676527 | 27271.4 |
| atp-dependent rna helicase srmb | FE383_RS13120 | Not Available | Positive | 2676659 - 2677993 | 49917.0 |
| lysr family transcriptional regulator | FE383_RS13125 | Not Available | Negative | 2678202 - 2679083 | 33245.2 |
| cysteine/o-acetylserine transporter | FE383_RS13130 | Not Available | Positive | 2679186 - 2679773 | 21249.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





