Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | FE383_RS13035 | Not Available | Positive | 2662522 - 2663370 | 30709.3 |
| 4fe-4s dicluster ferredoxin yfhl | FE383_RS13040 | Not Available | Positive | 2663426 - 2663686 | 9791.79 |
| type i toxin-antitoxin system toxin shob | FE383_RS13045 | Not Available | Negative | 2663880 - 2663960 | 3103.22 |
| holo-acp synthase | FE383_RS13050 | Not Available | Negative | 2664381 - 2664761 | 14053.1 |
| pyridoxine 5'-phosphate synthase | FE383_RS13055 | Not Available | Negative | 2664761 - 2665492 | 26385.9 |
| dna repair protein reco | FE383_RS13060 | Not Available | Negative | 2665504 - 2666232 | 27392.2 |
| gtpase era | FE383_RS13065 | Not Available | Negative | 2666244 - 2667149 | 33812.1 |
| ribonuclease iii | FE383_RS13070 | Not Available | Negative | 2667146 - 2667826 | 25551.6 |
| signal peptidase i | FE383_RS13075 | Not Available | Negative | 2668098 - 2669072 | 35962.3 |
| translation elongation factor 4 | FE383_RS13080 | Not Available | Negative | 2669088 - 2670887 | 66574.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





